- Banks
- Bank
- Generic bank in Gotham City.
- Buildings and Landmarks
- Batcave
- The gang finds Batman's old sidekicks' superhero costumes in the Batcave.
- Cemeteries and Graveyards
- Arkham Cemetery
- Cemetery on the grounds of Arkham Asylum that the Riddler mentions.
- Chemical Companies
- Gotham Chemical Storage
- When an alarm sounds from Gotham Chemical Storage, the Mystery Analysts of Gotham investigate, learning that several vials a radioactive substance called Isotope 29 have been stolen by th Crimson Cloak.
- Cities and Towns - U.S.
- Gotham City
- Batman invites the Mystery Inc. gang to join his own mystery investigating team in Gotham City called Mystery Analysts of Gotham.
- Cookies
- Cookie
- Generic box of cookies that Shaggy and Scooby eat in the Mystery Machine. Later Batman uses a box to distract Martian Manhunter.
- Diners
- Diner
- Batman tells the gang that he'll meet them at the malt shop on the corner of Spears and Ruby - which is simply called Diner.
- Hospitals-Mental Health
- Arkham Asylum
- Batman mentions that anyone that could be behind the mystery is either in Arkham Asylum or Blackgate Penitentiary. Later, they visit the Riddler at Arkham Asylum.
- Police Departments
- Gotham PD
- A Gotham Police Department detective confronts the gang at a diner after spotting the Mystery Machine on a camera near the exploded chemical storage facility.
- Prisons
- Blackgate Penitentiary
- Batman mentions that anyone that could be behind the mystery is either in Arkham Asylum or Blackgate Penitentiary. Later, they visit the Riddler at Arkham Asylum.
- Recipes
- Bat Gumbo
- A bad guy tells Batman he's going to make Bat Gumbo out of him.
- Squid Entrail Casserole
- Aquaman mentions a dish that Mira made for him, though apparently the squid had gone bad.
- Social Clubs
- Mystery Analysts of Gotham
- Batman invites the Mystery Inc. gang to join his own mystery investigating team in Gotham City called Mystery Analysts of Gotham.
- Mystery Inc.
- Batman invites the Mystery Inc. gang to join his own mystery investigating team in Gotham City called Mystery Analysts of Gotham.
- Substances
- Isotope 29
- When an alarm sounds from Gotham Chemical Storage, the Mystery Analysts of Gotham investigate, learning that several vials a radioactive substance called Isotope 29 have been stolen by th Crimson Cloak.
- Thoroughfares-Other
- Ruby
- Batman tells the gang that he'll meet them at the malt shop on the corner of Spears and Ruby - which is simply called Diner.
- Spears
- Batman tells the gang that he'll meet them at the malt shop on the corner of Spears and Ruby - which is simply called Diner.
- TV News
- Vehicles-Cars and Trucks
- Batmobile
- Batman drives the Batmobile through Gotham City.
- Mystery Machine
- After Batman invites the Mystery Inc. gang to join his mystery investigating team, the gang drives the Mystery Machine van to Gotham City.
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